Transcript: lnc-STX2-15:1

Basic information

LNCipedia transcript ID: lnc-STX2-15:1 
LNCipedia gene ID: lnc-STX2-15
Location (hg19): chr12:131878369-131878610
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 242 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr12_11884_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.2342 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STX2-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STX2-15:1
4.0 lnc-STX2-15:1
4.1 lnc-STX2-15:1
5.0 lnc-STX2-15:1
5.1 lnc-RIMBP2-20:1
5.2 lnc-STX2-15:1