Transcript: lnc-SULF1-3:2

Basic information

LNCipedia transcript ID: lnc-SULF1-3:2 
LNCipedia gene ID: lnc-SULF1-3
Location (hg19): chr8:70746364-70749542
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 734 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000528800; ENST00000528800.1; RP11-159H10.3-003; OTTHUMT00000381996.2
Alternative gene names: ENSG00000246528; RP11-159H10.3; ENSG00000246528.2; OTTHUMG00000165122.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.5126 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SULF1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SULF1-2:2
3.1 lnc-SULF1-3:2
4.0 lnc-SULF1-3:2
4.1 lnc-SULF1-3:2
5.0 lnc-SULF1-3:2
5.1 lnc-SULF1-3:2
5.2 lnc-SULF1-3:2