Transcript: lnc-SUMO1-8:4

Basic information

LNCipedia transcript ID: lnc-SUMO1-8:4 
LNCipedia gene ID: lnc-SUMO1-8
Location (hg19): chr2:202897493-202898267
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 775 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273209.1|ENST00000608741.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -301.8948 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMO1-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SUMO1-8:4
5.0 lnc-SUMO1-8:4
5.1 lnc-HSPD1-67:3
5.2 lnc-SUMO1-8:4