Transcript: lnc-SUMO4-5:3

Basic information

LNCipedia transcript ID: lnc-SUMO4-5:3 
LNCipedia gene ID: lnc-SUMO4-5
Location (hg19): chr6:149580755-149585909
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2592 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003qmi_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.4049 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMO4-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUMO4-5:3
4.0 lnc-SUMO4-5:3
4.1 lnc-SUMO4-5:3
5.0 lnc-SUMO4-5:3
5.1 lnc-ULBP2-17:3
5.2 lnc-SUMO4-5:3