Transcript: lnc-SVIL-7:1

Basic information

LNCipedia transcript ID: lnc-SVIL-7:1 
LNCipedia gene ID: lnc-SVIL-7
Location (hg19): chr10:29230679-29251289
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 255 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1530:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
RIAASKFLPTCSR 93.3333333333333% sense-1
Lee translation initiation sites non-coding 
PhyloCSF score -141.2507 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SVIL-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SVIL-7:1
4.1 lnc-SVIL-7:1
5.0 lnc-SVIL-7:1
5.1 lnc-MPP7-13:1
5.2 lnc-SVIL-7:1