Transcript: lnc-SYNCRIP-6:2

Basic information

LNCipedia transcript ID: lnc-SYNCRIP-6:2 
LNCipedia gene ID: lnc-SYNCRIP-6
Location (hg19): chr6:86227287-86243398
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 727 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT113840
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 92.8658 coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SYNCRIP-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SYNCRIP-6:2
4.0 lnc-SYNCRIP-6:2
4.1 lnc-SYNCRIP-6:2
5.0 lnc-SYNCRIP-6:2
5.1 lnc-CEP162-20:2
5.2 lnc-SYNCRIP-6:2