Transcript: lnc-SYT13-5:2

Basic information

LNCipedia transcript ID: lnc-SYT13-5:2 
LNCipedia gene ID: lnc-SYT13-5
Location (hg19): chr11:45128382-45132633
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 552 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT019006
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.7587 non-coding 
CPAT coding probability 5.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYT13-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SYT13-5:2
4.0 lnc-SYT13-5:2
4.1 lnc-SYT13-5:2
5.0 lnc-SYT13-5:2
5.1 lnc-RAG2-46:3
5.2 lnc-SYT13-5:2