Transcript: lnc-TACSTD2-2:4

Basic information

LNCipedia transcript ID: lnc-TACSTD2-2:4 
LNCipedia gene ID: lnc-TACSTD2-2
Location (hg19): chr1:59120412-59124660
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4249 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT003510
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.9431 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TACSTD2-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TACSTD2-2:4
4.0 lnc-TACSTD2-2:4
4.1 lnc-TACSTD2-2:4
5.0 lnc-TACSTD2-2:4
5.1 lnc-C8B-24:4
5.2 lnc-TACSTD2-2:4