Transcript: lnc-TAF7-9:1

Basic information

LNCipedia transcript ID: lnc-TAF7-9:1 
LNCipedia gene ID: lnc-TAF7-9
Location (hg19): chr5:140419876-140420490
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 615 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081437.1|FTMT21800009989.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -507.662 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF7-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC005609.1-9:1
5.0 lnc-AC005609.1-9:1
5.1 lnc-DND1-22:1
5.2 lnc-TAF7-9:1