Transcript: lnc-TANC1-6:2

Basic information

LNCipedia transcript ID: lnc-TANC1-6:2 
LNCipedia gene ID: lnc-TANC1-6
Location (hg19): chr2:160143411-160144339
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 929 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045274.1|FTMT20800009577.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -50.5379 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TANC1-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TANC1-6:2
5.0 lnc-TANC1-6:2
5.1 lnc-TANC1-6:2
5.2 lnc-TANC1-6:2