Transcript: lnc-TBC1D22A-4:11

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:11 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg19): chr22:48027452-48251349
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1786 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224271.1|ENST00000423737.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.5555 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBC1D22A-4:11
5.0 lnc-TBC1D22A-4:11
5.1 lnc-GRAMD4-8:9
5.2 lnc-TBC1D22A-4:11