Transcript: lnc-TBC1D22A-4:17

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:17 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg19): chr22:48027520-48104410
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2525 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224271.1|MICT00000235642.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.343 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBC1D22A-4:17
5.0 lnc-TBC1D22A-4:17
5.1 lnc-GRAMD4-8:15
5.2 lnc-TBC1D22A-4:17