Transcript: lnc-TBC1D22A-4:5

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:5 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg19): chr22:48027452-48038543
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1168 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT087355
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.9675 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D22A-4:5
4.0 lnc-TBC1D22A-4:5
4.1 lnc-TBC1D22A-4:5
5.0 lnc-TBC1D22A-4:5
5.1 lnc-GRAMD4-8:5
5.2 lnc-TBC1D22A-4:5