Transcript: lnc-TBC1D22A-4:7

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:7 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg19): chr22:48082309-48100349
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 350 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA925:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -112.9743 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TBC1D22A-4:7
4.1 lnc-TBC1D22A-4:7
5.0 lnc-TBC1D22A-4:7
5.1 lnc-GRAMD4-8:18
5.2 lnc-TBC1D22A-4:7