Transcript: lnc-TBC1D22A-4:8

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:8 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg19): chr22:48027452-48031373
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 629 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224271.1|ENST00000426452.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -163.3798 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBC1D22A-4:8
5.0 lnc-TBC1D22A-4:8
5.1 lnc-GRAMD4-8:6
5.2 lnc-TBC1D22A-4:8