Transcript: lnc-TBC1D28-7:15

Basic information

LNCipedia transcript ID: lnc-TBC1D28-7:15 
LNCipedia gene ID: lnc-TBC1D28-7
Location (hg19): chr17:18420604-18432126
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 617 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT146381
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.1591 non-coding 
CPAT coding probability 15.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D28-7:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM106A-2:17
4.0 lnc-FAM106A-2:17
4.1 lnc-FAM106A-2:17
5.0 lnc-FAM106A-2:17
5.1 lnc-B9D1-40:15
5.2 lnc-TBC1D28-7:15