Transcript: lnc-TBC1D28-7:22

Basic information

LNCipedia transcript ID: lnc-TBC1D28-7:22 
LNCipedia gene ID: lnc-TBC1D28-7
Location (hg19): chr17:18414603-18415702
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1100 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA600:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.8964 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D28-7:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM106A-2:25
4.1 lnc-FAM106A-2:25
5.0 lnc-FAM106A-2:25
5.1 lnc-B9D1-40:22
5.2 lnc-TBC1D28-7:22