Transcript: lnc-TBC1D3F-2:4

Basic information

LNCipedia transcript ID: lnc-TBC1D3F-2:4 
LNCipedia gene ID: lnc-TBC1D3F-2
Location (hg19): chr17:34855510-34857608
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1990 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT053219
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.1608 non-coding 
CPAT coding probability 54.01% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TBC1D3F-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D3G-2:3
4.0 lnc-TBC1D3G-2:3
4.1 lnc-TBC1D3G-2:3
5.0 lnc-TBC1D3G-2:3
5.1 lnc-SRCIN1-55:3
5.2 lnc-TBC1D3F-2:4