Transcript: lnc-TBC1D3K-1:1

Basic information

LNCipedia transcript ID: lnc-TBC1D3K-1:1 
LNCipedia gene ID: lnc-TBC1D3K-1
Location (hg19): chr17:36105178-36108563
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 688 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259549.1|ENST00000558143.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.7403 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D3K-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBC1D3F-1:5
5.0 lnc-TBC1D3F-1:5
5.1 lnc-RPL19-30:1
5.2 lnc-TBC1D3K-1:1