Transcript: lnc-TBC1D7-1:3

Basic information

LNCipedia transcript ID: lnc-TBC1D7-1:3 
LNCipedia gene ID: lnc-TBC1D7-1
Location (hg19): chr6:13275081-13328770
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1068 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT107798
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.2344 non-coding 
CPAT coding probability 4.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D7-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GFOD1-1:2
4.0 lnc-TBC1D7-1:3
4.1 lnc-TBC1D7-1:3
5.0 lnc-TBC1D7-1:3
5.1 lnc-ECI2-261:1
5.2 lnc-TBC1D7-1:3