Transcript: lnc-TBCK-3:4

Basic information

LNCipedia transcript ID: lnc-TBCK-3:4 
LNCipedia gene ID: lnc-TBCK-3
RefSeq ID: NR_125927
Location (hg19): chr4:106736302-106748329
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 350 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125927; NR_125927.1
Alternative gene names: LOC101929529


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -158.5902 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBCK-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBCK-3:4
4.0 lnc-TBCK-3:4
4.1 lnc-TBCK-3:4
5.0 lnc-TBCK-3:4
5.1 lnc-SLC9B2-38:2
5.2 lnc-TBCK-3:4