Transcript: lnc-TBL1XR1-17:1

Basic information

LNCipedia transcript ID: lnc-TBL1XR1-17:1 
LNCipedia gene ID: lnc-TBL1XR1-17
Location (hg19): chr3:175436019-175436458
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 440 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT093304
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.7361 non-coding 
CPAT coding probability 38.71% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TBL1XR1-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBL1XR1-17:1
4.0 lnc-TBL1XR1-17:1
4.1 lnc-TBL1XR1-17:1
5.0 lnc-TBL1XR1-17:1
5.1 lnc-TBL1XR1-17:1
5.2 lnc-TBL1XR1-17:1