Transcript: lnc-TBPL2-6:1

Basic information

LNCipedia transcript ID: lnc-TBPL2-6:1 
LNCipedia gene ID: lnc-TBPL2-6
Ensembl Gene ID: ENSG00000277763
Ensembl Transcript ID: ENST00000614633
Location (hg19): chr14:56584034-56584708
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 675 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614633.1
Alternative gene names: ENSG00000277763.1; CTD-2588E21.1; AL138995.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -320.219 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBPL2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-1085N6.3.1-6:1
4.1 lnc-RP11-1085N6.3.1-6:1
5.0 lnc-RP11-1085N6.3.1-6:1
5.1 lnc-RTN1-40:1
5.2 lnc-TBPL2-6:1