Transcript: lnc-TCIRG1-2:15

Basic information

LNCipedia transcript ID: lnc-TCIRG1-2:15 
LNCipedia gene ID: lnc-TCIRG1-2
Location (hg19): chr11:67889355-67895743
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6389 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255236.2|ENCT00000068686.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.5722 non-coding 
CPAT coding probability 6.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCIRG1-2:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TCIRG1-2:15
5.0 lnc-TCIRG1-2:15
5.1 lnc-TCIRG1-2:15
5.2 lnc-TCIRG1-2:15