Transcript: lnc-TCP11L2-4:5

Basic information

LNCipedia transcript ID: lnc-TCP11L2-4:5 
LNCipedia gene ID: lnc-TCP11L2-4
Location (hg19): chr12:106533401-106576795
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2825 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000010315.1|MICT00000085678.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.3742 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCP11L2-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TCP11L2-4:5
5.0 lnc-TCP11L2-4:5
5.1 lnc-TCP11L2-4:5
5.2 lnc-TCP11L2-4:5