Transcript: lnc-TDRD15-2:2

Basic information

LNCipedia transcript ID: lnc-TDRD15-2:2 
LNCipedia gene ID: lnc-TDRD15-2
Location (hg19): chr2:21267101-21268881
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1360 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003597; NONHSAT069476
Alternative gene names: XLOC_001386; linc-KLHL29-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.7739 non-coding 
CPAT coding probability 17.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD15-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC010872.2.1-2:2
3.1 lnc-AC010872.2.1-2:2
4.0 lnc-AC010872.2.1-2:2
4.1 lnc-AC010872.2.1-2:2
5.0 lnc-AC010872.2.1-2:2
5.1 lnc-SNX17-78:2
5.2 lnc-TDRD15-2:2