Transcript: lnc-TDRD15-5:1

Basic information

LNCipedia transcript ID: lnc-TDRD15-5:1 
LNCipedia gene ID: lnc-TDRD15-5
Location (hg19): chr2:22421608-22422083
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 272 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004715; NONHSAT069510
Alternative gene names: XLOC_001391; linc-KLHL29-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.6995 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD15-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC010872.2.1-5:1
3.1 lnc-AC010872.2.1-5:1
4.0 lnc-AC010872.2.1-5:1
4.1 lnc-AC010872.2.1-5:1
5.0 lnc-AC010872.2.1-5:1
5.1 lnc-SNX17-69:1
5.2 lnc-TDRD15-5:1