Transcript: lnc-TDRD3-11:1

Basic information

LNCipedia transcript ID: lnc-TDRD3-11:1 
LNCipedia gene ID: lnc-TDRD3-11
Location (hg19): chr13:60145130-60413385
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1950 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: l_859_chr13:60145129-60196720_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.4181 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TDRD3-11:1
4.0 lnc-TDRD3-11:1
4.1 lnc-TDRD3-11:1
5.0 lnc-TDRD3-11:1
5.1 lnc-KL-259:1
5.2 lnc-TDRD3-11:1