Transcript: lnc-TDRD3-14:5

Basic information

LNCipedia transcript ID: lnc-TDRD3-14:5 
LNCipedia gene ID: lnc-TDRD3-14
Location (hg19): chr13:60738252-60741911
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1997 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015047.1|MICT00000095367.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.3807 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-14:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TDRD3-14:5
5.0 lnc-TDRD3-14:5
5.1 lnc-KL-260:5
5.2 lnc-TDRD3-14:5