Transcript: lnc-TDRD3-15:2

Basic information

LNCipedia transcript ID: lnc-TDRD3-15:2 
LNCipedia gene ID: lnc-TDRD3-15
RefSeq ID: NR_109839
Location (hg19): chr13:60587437-60599286
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 569 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109839; NR_109839.1
Alternative gene names: ; DIAPH3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.3081 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-15:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TDRD3-4:10
4.0 DIAPH3-AS1:9
4.1 DIAPH3-AS1:9
5.0 DIAPH3-AS1:9
5.1 lnc-KL-302:2
5.2 lnc-TDRD3-15:2