Transcript: lnc-TDRD3-3:4

Basic information

LNCipedia transcript ID: lnc-TDRD3-3:4 
LNCipedia gene ID: lnc-TDRD3-3
Location (hg19): chr13:63609108-63671829
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 416 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034157; FPKM1_group_8034_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -230.3417 non-coding 
CPAT coding probability 7.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL445989.1-3:2
4.0 lnc-AL445989.1-3:2
4.1 lnc-AL445989.1-3:2
5.0 lnc-AL445989.1-3:2
5.1 lnc-KL-272:1
5.2 lnc-TDRD3-3:4