Transcript: lnc-TENM3-3:7

Basic information

LNCipedia transcript ID: lnc-TENM3-3:7 
LNCipedia gene ID: lnc-TENM3-3
Location (hg19): chr4:181157061-181158903
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1843 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000071146.1|FTMT21600010909.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.561 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TENM3-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ODZ3-3:7
5.0 lnc-ODZ3-3:7
5.1 lnc-FAM149A-67:7
5.2 lnc-TENM3-3:7