Transcript: lnc-TENM3-5:3

Basic information

LNCipedia transcript ID: lnc-TENM3-5:3 
LNCipedia gene ID: lnc-TENM3-5
Location (hg19): chr4:181688757-181752157
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2149 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000071192.1|MICT00000275172.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -35.1226 non-coding 
CPAT coding probability 3.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TENM3-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ODZ3-5:4
5.0 lnc-ODZ3-5:4
5.1 lnc-FAM149A-66:3
5.2 lnc-TENM3-5:3