Transcript: lnc-TEX51-4:1

Basic information

LNCipedia transcript ID: lnc-TEX51-4:1 
LNCipedia gene ID: lnc-TEX51-4
Location (hg19): chr2:127862718-127879890
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 432 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1944_chr2:127862717-127879890_lung
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -491.8397 non-coding 
CPAT coding probability 8.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEX51-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC114783.1.1-4:1
4.0 lnc-AC114783.1.1-4:1
4.1 lnc-AC114783.1.1-4:1
5.0 lnc-AC114783.1.1-4:1
5.1 lnc-MYO7B-7:1
5.2 lnc-TEX51-4:1