Transcript: lnc-TF-12:1

Basic information

LNCipedia transcript ID: lnc-TF-12:1 
LNCipedia gene ID: lnc-TF-12
Location (hg19): chr3:133503622-133515484
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 11863 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000641520.1
Alternative gene names: ENSG00000284714.1; AC080128.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.8078 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TF-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PPP2R3A-12:1
5.1 lnc-PPP2R3A-12:1
5.2 lnc-TF-12:1