Transcript: lnc-TFB2M-7:1

Basic information

LNCipedia transcript ID: lnc-TFB2M-7:1 
LNCipedia gene ID: lnc-TFB2M-7
Location (hg19): chr1:246227182-246239240
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 12001 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101165.1|ENCT00000040024.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 72.7425 coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TFB2M-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TFB2M-7:1
5.0 lnc-TFB2M-7:1
5.1 lnc-LYPD8-33:1
5.2 lnc-TFB2M-7:1