Transcript: lnc-TFDP2-11:2

Basic information

LNCipedia transcript ID: lnc-TFDP2-11:2 
LNCipedia gene ID: lnc-TFDP2-11
Location (hg19): chr3:141026454-141026775
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 322 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092425
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.0358 non-coding 
CPAT coding probability 19.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFDP2-11:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TFDP2-11:2
4.0 lnc-TFDP2-11:2
4.1 lnc-TFDP2-11:2
5.0 lnc-TFDP2-11:2
5.1 lnc-TFDP2-11:2
5.2 lnc-TFDP2-11:2