Transcript: lnc-TFDP2-15:1

Basic information

LNCipedia transcript ID: lnc-TFDP2-15:1 
LNCipedia gene ID: lnc-TFDP2-15
Location (hg19): chr3:140533337-140660490
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 393 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066304.1|FTMT20900071471.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.3798 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFDP2-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TFDP2-15:1
5.0 lnc-TFDP2-15:1
5.1 lnc-TFDP2-15:1
5.2 lnc-TFDP2-15:1