Transcript: lnc-TFEC-2:16

Basic information

LNCipedia transcript ID: lnc-TFEC-2:16 
LNCipedia gene ID: lnc-TFEC-2
Location (hg19): chr7:116073046-116139491
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 542 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237813.3|FTMT22500049678.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.2163 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFEC-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TFEC-2:16
5.0 lnc-TFEC-2:16
5.1 lnc-TFEC-2:16
5.2 lnc-TFEC-2:16