Transcript: lnc-TFEC-9:3

Basic information

LNCipedia transcript ID: lnc-TFEC-9:3 
LNCipedia gene ID: lnc-TFEC-9
Location (hg19): chr7:115998255-116041955
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 751 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3469_chr7:115998254-116028199_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.7908 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFEC-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TFEC-9:3
4.0 lnc-TFEC-9:3
4.1 lnc-TFEC-9:3
5.0 lnc-TFEC-9:3
5.1 lnc-TFEC-9:3
5.2 lnc-TFEC-9:3