Transcript: lnc-TGFBI-2:1

Basic information

LNCipedia transcript ID: lnc-TGFBI-2:1 
LNCipedia gene ID: lnc-TGFBI-2
Location (hg19): chr5:135468913-135489418
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 547 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT103952
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -5.8828 non-coding 
CPAT coding probability 12.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TGFBI-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBI-2:1
4.0 lnc-TGFBI-2:1
4.1 lnc-TGFBI-2:1
5.0 lnc-TGFBI-2:1
5.1 lnc-PDLIM4-90:1
5.2 lnc-TGFBI-2:1