Transcript: lnc-TGFBI-80:8

Basic information

LNCipedia transcript ID: lnc-TGFBI-80:8 
LNCipedia gene ID: lnc-TGFBI-80
Ensembl Gene ID: ENSG00000250378
Ensembl Transcript ID: ENST00000637197
Location (hg19): chr5:135157469-135162270
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1173 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637197.1
Alternative gene names: ENSG00000250378.3; AC114296.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -231.3747 non-coding 
CPAT coding probability 95.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TGFBI-80:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PDLIM4-80:8
5.1 lnc-PDLIM4-80:8
5.2 lnc-TGFBI-80:8