Transcript: lnc-THAP7-20:3

Basic information

LNCipedia transcript ID: lnc-THAP7-20:3 
LNCipedia gene ID: lnc-THAP7-20
Location (hg19): chr22:21365263-21365797
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 451 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT083621
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.0442 non-coding 
CPAT coding probability 54.83% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-THAP7-20:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THAP7-2:2
4.0 lnc-THAP7-2:2
4.1 lnc-THAP7-2:2
5.0 lnc-THAP7-2:2
5.1 lnc-SCARF2-20:3
5.2 lnc-THAP7-20:3