Transcript: lnc-THBS2-10:1

Basic information

LNCipedia transcript ID: lnc-THBS2-10:1 
LNCipedia gene ID: lnc-THBS2-10
Location (hg19): chr6:169570622-169572716
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1678 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3330_chr6:169570621-169572716_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.8672 non-coding 
CPAT coding probability 64.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-THBS2-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THBS2-10:1
4.0 lnc-THBS2-10:1
4.1 lnc-THBS2-10:1
5.0 lnc-THBS2-10:1
5.1 lnc-PRKN-80:1
5.2 lnc-THBS2-10:1