Transcript: lnc-THBS2-5:7

Basic information

LNCipedia transcript ID: lnc-THBS2-5:7 
LNCipedia gene ID: lnc-THBS2-5
RefSeq ID: NR_136248
Location (hg19): chr6:169360380-169364477
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3280 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136248.1
Alternative gene names: LOC105378146


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.4527 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THBS2-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PRKN-76:1
5.1 lnc-PRKN-76:1
5.2 lnc-THBS2-5:7