Transcript: lnc-THBS2-8:1

Basic information

LNCipedia transcript ID: lnc-THBS2-8:1 
LNCipedia gene ID: lnc-THBS2-8
Location (hg19): chr6:169252754-169256278
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 303 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012365; NONHSAT116159
Alternative gene names: XLOC_005930; linc-DACT2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.793 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THBS2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-THBS2-8:1
3.1 lnc-THBS2-8:1
4.0 lnc-THBS2-8:1
4.1 lnc-THBS2-8:1
5.0 lnc-THBS2-8:1
5.1 lnc-PRKN-74:1
5.2 lnc-THBS2-8:1