Transcript: lnc-THBS3-2:3

Basic information

LNCipedia transcript ID: lnc-THBS3-2:3 
LNCipedia gene ID: lnc-THBS3-2
Location (hg19): chr1:155165379-155166233
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 768 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT006702
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 451.5815 coding 
CPAT coding probability 48.25% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-THBS3-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THBS3-2:3
4.0 lnc-THBS3-2:3
4.1 lnc-THBS3-2:3
5.0 lnc-THBS3-2:3
5.1 lnc-MUC1-3:1
5.2 lnc-THBS3-2:3