Transcript: lnc-THOC2-8:6

Basic information

LNCipedia transcript ID: lnc-THOC2-8:6 
LNCipedia gene ID: lnc-THOC2-8
Location (hg19): chrX:122501310-122648362
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 926 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000114373.1|MICT00000379653.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.2355 non-coding 
CPAT coding probability 3.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THOC2-8:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRRFP1-5:7
5.0 lnc-MRRFP1-5:7
5.1 lnc-CT47A8-38:6
5.2 lnc-THOC2-8:6