Transcript: lnc-TIGD5-1:1

Basic information

LNCipedia transcript ID: lnc-TIGD5-1:1 
LNCipedia gene ID: lnc-TIGD5-1
Location (hg19): chr8:144683416-144685394
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1979 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606452.1
Alternative gene names: ENSG00000271912.1; RP11-661A12.14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3704 non-coding 
CPAT coding probability 3.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIGD5-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIGD5-1:1
4.0 lnc-TIGD5-1:1
4.1 lnc-TIGD5-1:1
5.0 lnc-TIGD5-1:1
5.1 lnc-GPT-39:1
5.2 lnc-TIGD5-1:1