Transcript: lnc-TINCR-5:1

Basic information

LNCipedia transcript ID: lnc-TINCR-5:1 
LNCipedia gene ID: lnc-TINCR-5
Location (hg19): chr19:5509182-5510391
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1210 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002mcb_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.3158 non-coding 
CPAT coding probability 58.30% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TINCR-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SAFB2-5:1
4.0 lnc-SAFB2-5:1
4.1 lnc-SAFB2-5:1
5.0 lnc-SAFB2-5:1
5.1 lnc-TIMM44-74:1
5.2 lnc-TINCR-5:1